The university saw a 2.6 million increase in its operating costs, including a 1.6m rise in staff costs because of pay awards and increased pension contributions.
The accounts showed that former principal and vice-chancellor Professor Anthony Cohen, who retired last summer, saw his final annual pay package increase to 194,000 from 171,000.
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Hide AdTotal income for the university in the year to 31 July rose by 4.2m to 35.2m – partly as a result of increasing student numbers – although 2.5m of the increase related to grants and compensation connected to its delayed move to a purpose-built campus in Musselburgh.
The deficit for the year was cut to 2.3m from 3m the previous year.